Dendritic cells and their co-stimulatory properties for cytotoxic T cells in melanoma Group Schenk The activation of an effective adaptive anti-tumor response relies mainly on presentation of tumor antigens and stimulation by DC. Despite extensive research, the phenotypes and functions of tumor-infiltrating DC (TIDC) remain largely elusive and cross-presentation of tumor antigen is not well understood. We are elucidating the phenotypes and functions of TIDC and how to manipulate them both in vitro and in vivo to induce a tumor- specific CTL response in melanoma. Thereby, we aim to identify ways to reprogram TIDC to present tumor antigens and activate an adaptive immune response against melanoma.
Highly multiplex, spatially resolved immunophenotyping of PDAC for biomarker discovery Group Schenk The tumor immune microenvironment in pancreatic ductal adenocarcinoma (PDAC) is diverse, comprising various cell types that may either enhance or attenuate tumor immunity and disease progression, as well as response to therapies. It is therefore essential to dissect the immunological landscape in human PDAC tissues and to assess the correlation of various cell subsets and tumor-derived immunosuppressive factors to patient survival and other clinical parameters. Utilizing a novel approach to perform spatially resolved multiplex immunohistochemistry, we intend to delineate the phenotypes of tumor-infiltrating immune subpopulations in exquisite detail. Integrating these findings with transcriptomic data and tumor genotype signatures will allow us to unravel the mechanistic and prognostic relevance of certain immune markers in PDAC. 25-plex imaging mass cytometry (IMC) image of a human PDAC tissue section shown in four images with 6 markers each. Overview (top), zoom (bottom)
Discovering novel mechanism of immune regulation in atopic dermatitis using high dimensional data Group Schenk Our research group employs cutting-edge methods to uncover key cellular mechanisms and molecular markers in atopic dermatitis (AD), aiming to identify innovative therapeutic targets and biomarkers. We study both adult and pediatric AD cohorts, focusing on interactions between innate and adaptive immunity, trained immunity, and immunoregulatory pathways. Our proteomic analyses have identified molecules modulating inflammation, revealing potential therapeutic strategies. Using advanced technologies like CITE-seq, CyTOF, imaging mass cytometry (IMC), and spatial transcriptomics, we investigate immune cell subsets and marker expression in blood and skin lesions, providing comprehensive insights into systemic and localized immune dynamics. Potential therapeutic targets are validated in murine AD models. Additionally, we explore the skin microbiome's composition and its critical role in AD, understanding its significant impact on immune responses and disease outcomes. 28-plex IMC image showing structural features, immune phenotypes, and activation markers in healthy skin (top) atopic dermatitis (bottom)
